Gene List
This API endpoint handles listing (/genes) and retrieval (/genes/<ID>/) of genes that are contained in the database due to their association to
genetic variants that are involved in at least one oligogenic combination in OLIDA.
GET /api/genecombinations/908/genes/?format=api
{ "data": [ { "type": "Gene", "id": "FEZF1", "attributes": { "go_molecular_function": [ "['RNA polymerase II cis-regulatory region sequence-specific DNA binding', 'protein binding', 'metal ion binding', 'DNA-binding transcription repressor activity, RNA polymerase II-specific', 'DNA-binding transcription factor activity']" ], "pathway_id": [], "essential_gene": "Essential", "status": "CU", "uniprot_acc": "A0PJY2", "ensembl_id": "None", "entrez_id": "ENSG00000128610", "chromosome_number": "7", "lastmodified": "2023-05-16T12:02:32.629633" }, "relationships": { "variant_set": { "meta": { "count": 6 }, "data": [ { "type": "SmallVariant", "id": "2686" }, { "type": "SmallVariant", "id": "2689" }, { "type": "SmallVariant", "id": "2718" }, { "type": "SmallVariant", "id": "2724" }, { "type": "SmallVariant", "id": "2821" }, { "type": "SmallVariant", "id": "3323" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/FEZF1/relationships/variant_set?format=api", "related": "https://olida.ibsquare.be/api/genes/FEZF1/variants/?format=api" } }, "genecombination_set": { "meta": { "count": 7 }, "data": [ { "type": "GeneCombination", "id": "893" }, { "type": "GeneCombination", "id": "894" }, { "type": "GeneCombination", "id": "903" }, { "type": "GeneCombination", "id": "905" }, { "type": "GeneCombination", "id": "908" }, { "type": "GeneCombination", "id": "940" }, { "type": "GeneCombination", "id": "1119" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/FEZF1/relationships/genecombination_set?format=api", "related": "https://olida.ibsquare.be/api/genes/FEZF1/genecombinations/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genes/FEZF1/?format=api" } }, { "type": "Gene", "id": "WDR11", "attributes": { "go_molecular_function": [ "['protein binding']" ], "pathway_id": [], "essential_gene": null, "status": "CU", "uniprot_acc": "Q9BZH6", "ensembl_id": "None", "entrez_id": "ENSG00000120008", "chromosome_number": "10", "lastmodified": "2021-10-18T11:00:44.980173" }, "relationships": { "variant_set": { "meta": { "count": 16 }, "data": [ { "type": "SmallVariant", "id": "27" }, { "type": "SmallVariant", "id": "782" }, { "type": "SmallVariant", "id": "1309" }, { "type": "SmallVariant", "id": "1315" }, { "type": "SmallVariant", "id": "1869" }, { "type": "SmallVariant", "id": "1870" }, { "type": "SmallVariant", "id": "2407" }, { "type": "SmallVariant", "id": "2501" }, { "type": "SmallVariant", "id": "2503" }, { "type": "SmallVariant", "id": "2511" }, { "type": "SmallVariant", "id": "2665" }, { "type": "SmallVariant", "id": "2680" }, { "type": "SmallVariant", "id": "2729" }, { "type": "SmallVariant", "id": "2855" }, { "type": "SmallVariant", "id": "2936" }, { "type": "SmallVariant", "id": "3366" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/WDR11/relationships/variant_set?format=api", "related": "https://olida.ibsquare.be/api/genes/WDR11/variants/?format=api" } }, "genecombination_set": { "meta": { "count": 12 }, "data": [ { "type": "GeneCombination", "id": "10" }, { "type": "GeneCombination", "id": "245" }, { "type": "GeneCombination", "id": "410" }, { "type": "GeneCombination", "id": "411" }, { "type": "GeneCombination", "id": "621" }, { "type": "GeneCombination", "id": "851" }, { "type": "GeneCombination", "id": "820" }, { "type": "GeneCombination", "id": "886" }, { "type": "GeneCombination", "id": "892" }, { "type": "GeneCombination", "id": "908" }, { "type": "GeneCombination", "id": "976" }, { "type": "GeneCombination", "id": "848" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/WDR11/relationships/genecombination_set?format=api", "related": "https://olida.ibsquare.be/api/genes/WDR11/genecombinations/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genes/WDR11/?format=api" } } ], "meta": { "database_name": "OLIgogenic diseases DAtabase (OLIDA)", "resource_url": "olida.ibsquare.be", "api_release_year": "2021", "api_developer": [ [ "Arnau Dillen", "arnau.dillen@ulb.ac.be" ], [ "Charlotte Nachtegael", "charlotte.nachtegael@ulb.be" ] ], "api_version": "0.3", "api_maintainers": [ [ "Charlotte Nachtegael", "charlotte.nachtegael@ulb.be" ] ], "api_documentation": [ "olida.ibsquare.be/api/swagger", "olida.ibsquare.be/api/redoc" ], "copyright": "Copyright (c) 2025 · OLIDA All Rights Reserved.", "license": "CC Attribution-NonCommercial 4.0 International License", "ontologies": { "ORDO": "http://bioportal.bioontology.org/ontologies/ORDO", "GENO": "http://purl.obolibrary.org/obo/geno.owl", "MI": "http://purl.obolibrary.org/obo/mi.owl", "NCIT": "http://purl.obolibrary.org/obo/ncit.owl", "OGI": "http://purl.obolibrary.org/obo/ogi.owl", "OGG": "http://purl.obolibrary.org/obo/ogg.owl" }, "relevant_publications_doi": [ "10.1093/nar/gkv1068", "10.1093/database/baac023" ], "size": 2 } }