Gene List
This API endpoint handles listing (/genes) and retrieval (/genes/<ID>/) of genes that are contained in the database due to their association to
genetic variants that are involved in at least one oligogenic combination in OLIDA.
GET /api/genecombinations/1240/genes/?format=api
{ "data": [ { "type": "Gene", "id": "COL17A1", "attributes": { "go_molecular_function": [ "['extracellular matrix structural constituent conferring tensile strength', 'protein binding', 'extracellular matrix structural constituent']" ], "pathway_id": [ "kegg_path:hsa04974", "R-HSA-1280218", "R-HSA-1442490", "R-HSA-1474228", "R-HSA-1474244", "R-HSA-1474290", "R-HSA-1500931", "R-HSA-1650814", "R-HSA-168256", "R-HSA-198933", "R-HSA-2022090", "R-HSA-446107", "R-HSA-446728", "R-HSA-8948216" ], "essential_gene": "Essential", "status": "CU", "uniprot_acc": "None", "ensembl_id": "None", "entrez_id": "ENSG00000065618", "chromosome_number": "10", "lastmodified": "2021-10-18T11:00:44.261063" }, "relationships": { "variant_set": { "meta": { "count": 6 }, "data": [ { "type": "SmallVariant", "id": "260" }, { "type": "SmallVariant", "id": "261" }, { "type": "SmallVariant", "id": "942" }, { "type": "SmallVariant", "id": "1223" }, { "type": "SmallVariant", "id": "3452" }, { "type": "SmallVariant", "id": "3676" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/COL17A1/relationships/variant_set?format=api", "related": "https://olida.ibsquare.be/api/genes/COL17A1/variants/?format=api" } }, "genecombination_set": { "meta": { "count": 5 }, "data": [ { "type": "GeneCombination", "id": "95" }, { "type": "GeneCombination", "id": "301" }, { "type": "GeneCombination", "id": "389" }, { "type": "GeneCombination", "id": "1161" }, { "type": "GeneCombination", "id": "1240" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/COL17A1/relationships/genecombination_set?format=api", "related": "https://olida.ibsquare.be/api/genes/COL17A1/genecombinations/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genes/COL17A1/?format=api" } }, { "type": "Gene", "id": "LAMA3", "attributes": { "go_molecular_function": [ "['structural molecule activity', 'integrin binding', 'extracellular matrix structural constituent']" ], "pathway_id": [ "kegg_path:hsa04151", "kegg_path:hsa04510", "kegg_path:hsa04512", "kegg_path:hsa05145", "kegg_path:hsa05146", "kegg_path:hsa05165", "kegg_path:hsa05200", "kegg_path:hsa05222", "R-HSA-1474228", "R-HSA-1474244", "R-HSA-1474290", "R-HSA-1500931", "R-HSA-162582", "R-HSA-2022090", "R-HSA-2214320", "R-HSA-3000157", "R-HSA-3000171", "R-HSA-3000178", "R-HSA-446107", "R-HSA-446728", "R-HSA-6806834", "R-HSA-8874081", "R-HSA-8875878", "R-HSA-9006934" ], "essential_gene": "Essential", "status": "CU", "uniprot_acc": "Q16787", "ensembl_id": "None", "entrez_id": "ENSG00000053747", "chromosome_number": "18", "lastmodified": "2021-10-18T11:00:44.486699" }, "relationships": { "variant_set": { "meta": { "count": 6 }, "data": [ { "type": "SmallVariant", "id": "1105" }, { "type": "SmallVariant", "id": "1220" }, { "type": "SmallVariant", "id": "1222" }, { "type": "SmallVariant", "id": "2230" }, { "type": "SmallVariant", "id": "3450" }, { "type": "SmallVariant", "id": "3675" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/LAMA3/relationships/variant_set?format=api", "related": "https://olida.ibsquare.be/api/genes/LAMA3/variants/?format=api" } }, "genecombination_set": { "meta": { "count": 6 }, "data": [ { "type": "GeneCombination", "id": "361" }, { "type": "GeneCombination", "id": "388" }, { "type": "GeneCombination", "id": "389" }, { "type": "GeneCombination", "id": "756" }, { "type": "GeneCombination", "id": "1160" }, { "type": "GeneCombination", "id": "1240" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/LAMA3/relationships/genecombination_set?format=api", "related": "https://olida.ibsquare.be/api/genes/LAMA3/genecombinations/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genes/LAMA3/?format=api" } } ], "meta": { "database_name": "OLIgogenic diseases DAtabase (OLIDA)", "resource_url": "olida.ibsquare.be", "api_release_year": "2021", "api_developer": [ [ "Arnau Dillen", "arnau.dillen@ulb.ac.be" ], [ "Charlotte Nachtegael", "charlotte.nachtegael@ulb.be" ] ], "api_version": "0.3", "api_maintainers": [ [ "Charlotte Nachtegael", "charlotte.nachtegael@ulb.be" ] ], "api_documentation": [ "olida.ibsquare.be/api/swagger", "olida.ibsquare.be/api/redoc" ], "copyright": "Copyright (c) 2025 · OLIDA All Rights Reserved.", "license": "CC Attribution-NonCommercial 4.0 International License", "ontologies": { "ORDO": "http://bioportal.bioontology.org/ontologies/ORDO", "GENO": "http://purl.obolibrary.org/obo/geno.owl", "MI": "http://purl.obolibrary.org/obo/mi.owl", "NCIT": "http://purl.obolibrary.org/obo/ncit.owl", "OGI": "http://purl.obolibrary.org/obo/ogi.owl", "OGG": "http://purl.obolibrary.org/obo/ogg.owl" }, "relevant_publications_doi": [ "10.1093/nar/gkv1068", "10.1093/database/baac023" ], "size": 2 } }