Gene Combination List
This API endpoint handles listing (/references) and retrieval (/references/<ID>/) of References from the database
that support the inclusion of at least one oligogenic combination in OLIDA.
GET /api/genes/LAMA3/genecombinations/?format=api
{ "data": [ { "type": "GeneCombination", "id": "361", "attributes": { "gene_relationship": [ "Affecting the same tissue", "Monogenic experiments only", "Relevant pathways for phenotype" ], "protein_interactions": [], "common_pathways": [], "genecomb_metascore": 1, "lastmodified": "2021-10-18T11:01:04.062234" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI521" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/361/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/361/combinations/?format=api" } }, "genes": { "meta": { "count": 2 }, "data": [ { "type": "Gene", "id": "ENAM" }, { "type": "Gene", "id": "LAMA3" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/361/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/361/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/361/?format=api" } }, { "type": "GeneCombination", "id": "388", "attributes": { "gene_relationship": [ "Involved in the same disease", "Affecting the same tissue", "Monogenic experiments only", "Relevant pathways for phenotype" ], "protein_interactions": [], "common_pathways": [ "Human papillomavirus infection", "Pathways in cancer", "Signal Transduction" ], "genecomb_metascore": 1, "lastmodified": "2021-10-18T11:01:05.880959" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI576" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/388/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/388/combinations/?format=api" } }, "genes": { "meta": { "count": 2 }, "data": [ { "type": "Gene", "id": "LAMA3" }, { "type": "Gene", "id": "WNT10A" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/388/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/388/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/388/?format=api" } }, { "type": "GeneCombination", "id": "389", "attributes": { "gene_relationship": [ "Affecting the same tissue", "Monogenic experiments only", "Relevant pathways for phenotype" ], "protein_interactions": [], "common_pathways": [ "Cell junction organization", "Extracellular matrix organization", "Assembly of collagen fibrils and other multimeric structures", "Collagen formation", "Degradation of the extracellular matrix", "Cell-Cell communication", "Type I hemidesmosome assembly", "Signal Transduction" ], "genecomb_metascore": 1, "lastmodified": "2021-10-18T11:01:05.919713" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI577" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/389/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/389/combinations/?format=api" } }, "genes": { "meta": { "count": 3 }, "data": [ { "type": "Gene", "id": "COL17A1" }, { "type": "Gene", "id": "DKK1" }, { "type": "Gene", "id": "LAMA3" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/389/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/389/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/389/?format=api" } }, { "type": "GeneCombination", "id": "756", "attributes": { "gene_relationship": [ "Involved in the same disease", "Same protein complex", "Directly interacting", "Same pathway", "Relevant pathways for phenotype" ], "protein_interactions": [ "(LAMA3, LAMB3)" ], "common_pathways": [ "Extracellular matrix organization", "Toxoplasmosis", "Laminin interactions", "Pathways in cancer", "MET promotes cell motility", "Focal adhesion", "Signaling by MET", "Anchoring fibril formation", "Signal Transduction", "Amoebiasis", "Cell junction organization", "ECM-receptor interaction", "Non-integrin membrane-ECM interactions", "Cell-Cell communication", "PI3K-Akt signaling pathway", "Small cell lung cancer", "Signaling by Receptor Tyrosine Kinases", "Human papillomavirus infection", "MET activates PTK2 signaling", "Assembly of collagen fibrils and other multimeric structures", "Degradation of the extracellular matrix", "Type I hemidesmosome assembly", "Collagen formation" ], "genecomb_metascore": 2, "lastmodified": "2022-08-04T14:15:02.997772" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI1031" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/756/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/756/combinations/?format=api" } }, "genes": { "meta": { "count": 2 }, "data": [ { "type": "Gene", "id": "LAMA3" }, { "type": "Gene", "id": "LAMB3" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/756/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/756/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/756/?format=api" } }, { "type": "GeneCombination", "id": "1160", "attributes": { "gene_relationship": [ "Monogenic experiments only", "Relevant pathways for phenotype", "Involved in the same disease" ], "protein_interactions": [], "common_pathways": [], "genecomb_metascore": 1, "lastmodified": "2024-03-01T14:35:07.396840" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI1641" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/1160/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/1160/combinations/?format=api" } }, "genes": { "meta": { "count": 2 }, "data": [ { "type": "Gene", "id": "AMELX" }, { "type": "Gene", "id": "LAMA3" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/1160/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/1160/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/1160/?format=api" } }, { "type": "GeneCombination", "id": "1240", "attributes": { "gene_relationship": [ "Involved in the same disease", "Relevant pathways for phenotype", "Affecting the same tissue" ], "protein_interactions": [], "common_pathways": [ "Assembly of collagen fibrils and other multimeric structures", "Cell-Cell communication", "Degradation of the extracellular matrix", "Collagen formation", "Cell junction organization", "Type I hemidesmosome assembly", "Extracellular matrix organization" ], "genecomb_metascore": 1, "lastmodified": "2024-03-01T14:32:09.357251" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI1733" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/1240/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/1240/combinations/?format=api" } }, "genes": { "meta": { "count": 2 }, "data": [ { "type": "Gene", "id": "COL17A1" }, { "type": "Gene", "id": "LAMA3" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/1240/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/1240/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/1240/?format=api" } } ] }