Gene Combination List
This API endpoint handles listing (/references) and retrieval (/references/<ID>/) of References from the database
that support the inclusion of at least one oligogenic combination in OLIDA.
GET /api/genes/OPTN/genecombinations/?format=api
{ "data": [ { "type": "GeneCombination", "id": "248", "attributes": { "gene_relationship": [ "Directly interacting", "Same protein complex", "Involved in the same disease", "Relevant pathways for phenotype", "Same pathway", "Similar function" ], "protein_interactions": [ "(OPTN, TBK1)" ], "common_pathways": [ "Amyotrophic lateral sclerosis", "Pathways of neurodegeneration - multiple diseases", "Mitophagy - animal" ], "genecomb_metascore": 2, "lastmodified": "2021-10-18T11:00:58.219360" }, "relationships": { "combination_set": { "meta": { "count": 3 }, "data": [ { "type": "Combination", "id": "OLI360" }, { "type": "Combination", "id": "OLI641" }, { "type": "Combination", "id": "OLI644" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/248/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/248/combinations/?format=api" } }, "genes": { "meta": { "count": 2 }, "data": [ { "type": "Gene", "id": "OPTN" }, { "type": "Gene", "id": "TBK1" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/248/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/248/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/248/?format=api" } }, { "type": "GeneCombination", "id": "290", "attributes": { "gene_relationship": [ "Involved in the same disease", "Monogenic experiments only", "Relevant pathways for phenotype" ], "protein_interactions": [], "common_pathways": [], "genecomb_metascore": 0, "lastmodified": "2021-10-18T11:01:00.791054" }, "relationships": { "combination_set": { "meta": { "count": 2 }, "data": [ { "type": "Combination", "id": "OLI431" }, { "type": "Combination", "id": "OLI435" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/290/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/290/combinations/?format=api" } }, "genes": { "meta": { "count": 2 }, "data": [ { "type": "Gene", "id": "OPTN" }, { "type": "Gene", "id": "SETX" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/290/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/290/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/290/?format=api" } }, { "type": "GeneCombination", "id": "294", "attributes": { "gene_relationship": [ "Monogenic experiments only", "Relevant pathways for phenotype" ], "protein_interactions": [], "common_pathways": [ "Pathways of neurodegeneration - multiple diseases" ], "genecomb_metascore": 0, "lastmodified": "2021-10-18T11:01:00.969248" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI436" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/294/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/294/combinations/?format=api" } }, "genes": { "meta": { "count": 2 }, "data": [ { "type": "Gene", "id": "NEFH" }, { "type": "Gene", "id": "OPTN" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/294/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/294/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/294/?format=api" } }, { "type": "GeneCombination", "id": "295", "attributes": { "gene_relationship": [ "Involved in the same disease", "Affecting the same tissue", "Monogenic experiments only", "Relevant pathways for phenotype" ], "protein_interactions": [], "common_pathways": [ "Amyotrophic lateral sclerosis", "Membrane Trafficking", "Pathways of neurodegeneration - multiple diseases" ], "genecomb_metascore": 1, "lastmodified": "2021-10-18T11:01:01.009925" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI437" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/295/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/295/combinations/?format=api" } }, "genes": { "meta": { "count": 3 }, "data": [ { "type": "Gene", "id": "DCTN1" }, { "type": "Gene", "id": "OPTN" }, { "type": "Gene", "id": "TARDBP" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/295/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/295/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/295/?format=api" } }, { "type": "GeneCombination", "id": "297", "attributes": { "gene_relationship": [ "Directly interacting", "Involved in the same disease", "Affecting the same tissue", "Relevant pathways for phenotype", "Monogenic experiments only" ], "protein_interactions": [ "(OPTN, SOD1)" ], "common_pathways": [ "Amyotrophic lateral sclerosis", "Pathways of neurodegeneration - multiple diseases" ], "genecomb_metascore": 2, "lastmodified": "2021-10-18T11:01:01.068096" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI439" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/297/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/297/combinations/?format=api" } }, "genes": { "meta": { "count": 2 }, "data": [ { "type": "Gene", "id": "OPTN" }, { "type": "Gene", "id": "SOD1" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/297/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/297/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/297/?format=api" } }, { "type": "GeneCombination", "id": "300", "attributes": { "gene_relationship": [ "Monogenic experiments only", "Relevant pathways for phenotype" ], "protein_interactions": [], "common_pathways": [ "Amyotrophic lateral sclerosis", "Pathways of neurodegeneration - multiple diseases" ], "genecomb_metascore": 0, "lastmodified": "2021-10-18T11:01:01.160316" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI442" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/300/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/300/combinations/?format=api" } }, "genes": { "meta": { "count": 2 }, "data": [ { "type": "Gene", "id": "FIG4" }, { "type": "Gene", "id": "OPTN" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/300/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/300/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/300/?format=api" } }, { "type": "GeneCombination", "id": "377", "attributes": { "gene_relationship": [ "Involved in the same disease", "Colocalization", "Relevant pathways for phenotype" ], "protein_interactions": [], "common_pathways": [ "Pathways of neurodegeneration - multiple diseases" ], "genecomb_metascore": 1, "lastmodified": "2021-10-18T11:01:05.214137" }, "relationships": { "combination_set": { "meta": { "count": 5 }, "data": [ { "type": "Combination", "id": "OLI561" }, { "type": "Combination", "id": "OLI579" }, { "type": "Combination", "id": "OLI630" }, { "type": "Combination", "id": "OLI631" }, { "type": "Combination", "id": "OLI774" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/377/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/377/combinations/?format=api" } }, "genes": { "meta": { "count": 2 }, "data": [ { "type": "Gene", "id": "C9orf72" }, { "type": "Gene", "id": "OPTN" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/377/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/377/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/377/?format=api" } }, { "type": "GeneCombination", "id": "390", "attributes": { "gene_relationship": [ "Involved in the same disease", "Relevant pathways for phenotype" ], "protein_interactions": [], "common_pathways": [ "Amyotrophic lateral sclerosis", "Pathways of neurodegeneration - multiple diseases" ], "genecomb_metascore": 1, "lastmodified": "2021-10-18T11:01:05.961390" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI578" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/390/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/390/combinations/?format=api" } }, "genes": { "meta": { "count": 3 }, "data": [ { "type": "Gene", "id": "ATXN2" }, { "type": "Gene", "id": "C9orf72" }, { "type": "Gene", "id": "OPTN" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/390/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/390/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/390/?format=api" } }, { "type": "GeneCombination", "id": "432", "attributes": { "gene_relationship": [ "Involved in the same disease" ], "protein_interactions": [], "common_pathways": [ "Amyotrophic lateral sclerosis", "Pathways of neurodegeneration - multiple diseases" ], "genecomb_metascore": 0, "lastmodified": "2021-10-18T11:01:08.546191" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI629" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/432/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/432/combinations/?format=api" } }, "genes": { "meta": { "count": 3 }, "data": [ { "type": "Gene", "id": "C9orf72" }, { "type": "Gene", "id": "FUS" }, { "type": "Gene", "id": "OPTN" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/432/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/432/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/432/?format=api" } }, { "type": "GeneCombination", "id": "455", "attributes": { "gene_relationship": [ "Involved in the same disease" ], "protein_interactions": [], "common_pathways": [ "Amyotrophic lateral sclerosis" ], "genecomb_metascore": 0, "lastmodified": "2021-10-18T11:01:09.686214" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI662" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/455/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/455/combinations/?format=api" } }, "genes": { "meta": { "count": 2 }, "data": [ { "type": "Gene", "id": "HNRNPA1" }, { "type": "Gene", "id": "OPTN" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/455/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/455/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/455/?format=api" } }, { "type": "GeneCombination", "id": "560", "attributes": { "gene_relationship": [ "Involved in the same disease" ], "protein_interactions": [], "common_pathways": [ "Amyotrophic lateral sclerosis", "Pathways of neurodegeneration - multiple diseases" ], "genecomb_metascore": 0, "lastmodified": "2021-10-18T11:01:16.379114" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI776" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/560/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/560/combinations/?format=api" } }, "genes": { "meta": { "count": 2 }, "data": [ { "type": "Gene", "id": "FUS" }, { "type": "Gene", "id": "OPTN" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/560/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/560/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/560/?format=api" } }, { "type": "GeneCombination", "id": "1212", "attributes": { "gene_relationship": [ "Involved in the same disease", "Relevant pathways for phenotype" ], "protein_interactions": [ "(OPTN, SOD1)", "(OPTN, TBK1)" ], "common_pathways": [ "Pathways of neurodegeneration - multiple diseases", "Amyotrophic lateral sclerosis" ], "genecomb_metascore": 2, "lastmodified": "2024-02-29T15:02:22.625157" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI1699" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/1212/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/1212/combinations/?format=api" } }, "genes": { "meta": { "count": 3 }, "data": [ { "type": "Gene", "id": "OPTN" }, { "type": "Gene", "id": "SOD1" }, { "type": "Gene", "id": "TBK1" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/1212/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/1212/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/1212/?format=api" } }, { "type": "GeneCombination", "id": "750", "attributes": { "gene_relationship": [ "Involved in the same disease", "Monogenic experiments only", "Same pathway", "Relevant pathways for phenotype" ], "protein_interactions": [], "common_pathways": [ "Amyotrophic lateral sclerosis" ], "genecomb_metascore": 1, "lastmodified": "2024-03-01T14:55:15.666994" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI1015" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/750/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/750/combinations/?format=api" } }, "genes": { "meta": { "count": 2 }, "data": [ { "type": "Gene", "id": "GLE1" }, { "type": "Gene", "id": "OPTN" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/750/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/750/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/750/?format=api" } } ] }