Gene Combination List
This API endpoint handles listing (/references) and retrieval (/references/<ID>/) of References from the database
that support the inclusion of at least one oligogenic combination in OLIDA.
GET /api/genes/MKS1/genecombinations/?format=api
{ "data": [ { "type": "GeneCombination", "id": "475", "attributes": { "gene_relationship": [ "Same organelle", "Affecting the same tissue", "Relevant pathways for phenotype" ], "protein_interactions": [], "common_pathways": [], "genecomb_metascore": 2, "lastmodified": "2021-10-18T11:01:10.491713" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI686" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/475/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/475/combinations/?format=api" } }, "genes": { "meta": { "count": 4 }, "data": [ { "type": "Gene", "id": "CELSR1" }, { "type": "Gene", "id": "LRP2" }, { "type": "Gene", "id": "MKS1" }, { "type": "Gene", "id": "SHH" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/475/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/475/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/475/?format=api" } }, { "type": "GeneCombination", "id": "834", "attributes": { "gene_relationship": [ "Same protein complex", "Directly interacting", "Colocalization", "Same pathway", "Similar function", "Relevant pathways for phenotype" ], "protein_interactions": [ "(CEP290, BBS4)", "(CEP290, BBS1)", "(CEP290, TTC8)", "(BBS4, BBS1)", "(BBS4, TTC8)", "(BBS1, TTC8)" ], "common_pathways": [ "Organelle biogenesis and maintenance", "Cilium Assembly" ], "genecomb_metascore": 2, "lastmodified": "2024-03-01T14:46:41.795324" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI1146" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/834/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/834/combinations/?format=api" } }, "genes": { "meta": { "count": 5 }, "data": [ { "type": "Gene", "id": "BBS1" }, { "type": "Gene", "id": "BBS4" }, { "type": "Gene", "id": "CEP290" }, { "type": "Gene", "id": "MKS1" }, { "type": "Gene", "id": "TTC8" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/834/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/834/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/834/?format=api" } }, { "type": "GeneCombination", "id": "1012", "attributes": { "gene_relationship": [ "Colocalization", "Same pathway", "Involved in the same disease" ], "protein_interactions": [], "common_pathways": [ "Organelle biogenesis and maintenance", "Cilium Assembly" ], "genecomb_metascore": 2, "lastmodified": "2024-03-01T14:21:54.586828" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI1443" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/1012/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/1012/combinations/?format=api" } }, "genes": { "meta": { "count": 2 }, "data": [ { "type": "Gene", "id": "BBS1" }, { "type": "Gene", "id": "MKS1" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/1012/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/1012/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/1012/?format=api" } }, { "type": "GeneCombination", "id": "1016", "attributes": { "gene_relationship": [ "Colocalization", "Same pathway", "Involved in the same disease" ], "protein_interactions": [], "common_pathways": [ "Organelle biogenesis and maintenance", "Cilium Assembly" ], "genecomb_metascore": 2, "lastmodified": "2024-03-01T14:21:32.468294" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI1447" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/1016/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/1016/combinations/?format=api" } }, "genes": { "meta": { "count": 2 }, "data": [ { "type": "Gene", "id": "BBS2" }, { "type": "Gene", "id": "MKS1" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/1016/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/1016/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/1016/?format=api" } }, { "type": "GeneCombination", "id": "1179", "attributes": { "gene_relationship": [], "protein_interactions": [], "common_pathways": [ "Organelle biogenesis and maintenance", "Anchoring of the basal body to the plasma membrane", "Cilium Assembly", "Signal Transduction" ], "genecomb_metascore": 2, "lastmodified": "2024-02-29T15:02:21.872912" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI1666" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/1179/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/1179/combinations/?format=api" } }, "genes": { "meta": { "count": 2 }, "data": [ { "type": "Gene", "id": "MKS1" }, { "type": "Gene", "id": "NPHP4" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/1179/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/1179/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/1179/?format=api" } } ] }