Gene List
This API endpoint handles listing (/genes) and retrieval (/genes/<ID>/) of genes that are contained in the database due to their association to
genetic variants that are involved in at least one oligogenic combination in OLIDA.
GET /api/genecombinations/876/genes/?format=api
{ "data": [ { "type": "Gene", "id": "TP63", "attributes": { "go_molecular_function": [ "['chromatin binding', 'RNA polymerase II cis-regulatory region sequence-specific DNA binding', 'damaged DNA binding', 'WW domain binding', 'DNA-binding transcription activator activity, RNA polymerase II-specific', 'p53 binding', 'DNA-binding transcription factor activity, RNA polymerase II-specific', 'DNA binding', 'protein binding', 'metal ion binding', 'MDM2/MDM4 family protein binding', 'identical protein binding', 'DNA-binding transcription factor activity']" ], "pathway_id": [ "kegg_path:hsa05206", "kegg_path:hsa05206", "R-HSA-109581", "R-HSA-109606", "R-HSA-114452", "R-HSA-139915", "R-HSA-212436", "R-HSA-3700989", "R-HSA-5357801", "R-HSA-5628897", "R-HSA-5633007", "R-HSA-5633008", "R-HSA-6803204", "R-HSA-6803205", "R-HSA-6803207", "R-HSA-6803211", "R-HSA-6804759", "R-HSA-73857", "R-HSA-74160" ], "essential_gene": "Essential", "status": "CU", "uniprot_acc": "Q9H3D4", "ensembl_id": "None", "entrez_id": "ENSG00000073282", "chromosome_number": "3", "lastmodified": "2022-08-04T14:14:58.444331" }, "relationships": { "variant_set": { "meta": { "count": 2 }, "data": [ { "type": "SmallVariant", "id": "2329" }, { "type": "SmallVariant", "id": "2632" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/TP63/relationships/variant_set?format=api", "related": "https://olida.ibsquare.be/api/genes/TP63/variants/?format=api" } }, "genecombination_set": { "meta": { "count": 2 }, "data": [ { "type": "GeneCombination", "id": "784" }, { "type": "GeneCombination", "id": "876" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/TP63/relationships/genecombination_set?format=api", "related": "https://olida.ibsquare.be/api/genes/TP63/genecombinations/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genes/TP63/?format=api" } }, { "type": "Gene", "id": "WNT10A", "attributes": { "go_molecular_function": [ "['receptor ligand activity', 'cytokine activity', 'frizzled binding']" ], "pathway_id": [ "kegg_path:hsa04150", "kegg_path:hsa04310", "kegg_path:hsa04390", "kegg_path:hsa04550", "kegg_path:hsa04916", "kegg_path:hsa04934", "kegg_path:hsa05010", "kegg_path:hsa05022", "kegg_path:hsa05165", "kegg_path:hsa05200", "kegg_path:hsa05205", "kegg_path:hsa05217", "kegg_path:hsa05224", "kegg_path:hsa05225", "kegg_path:hsa05226", "kegg_path:hsa04150", "kegg_path:hsa04310", "kegg_path:hsa04390", "kegg_path:hsa04550", "kegg_path:hsa04916", "kegg_path:hsa04934", "kegg_path:hsa05010", "kegg_path:hsa05022", "kegg_path:hsa05165", "kegg_path:hsa05200", "kegg_path:hsa05205", "kegg_path:hsa05217", "kegg_path:hsa05224", "kegg_path:hsa05225", "kegg_path:hsa05226", "R-HSA-162582", "R-HSA-195721", "R-HSA-3238698", "R-HSA-372790", "R-HSA-373080", "R-HSA-500792" ], "essential_gene": null, "status": "CU", "uniprot_acc": "Q9GZT5", "ensembl_id": "None", "entrez_id": "ENSG00000135925", "chromosome_number": "2", "lastmodified": "2021-10-18T11:00:44.742444" }, "relationships": { "variant_set": { "meta": { "count": 8 }, "data": [ { "type": "SmallVariant", "id": "323" }, { "type": "SmallVariant", "id": "327" }, { "type": "SmallVariant", "id": "1219" }, { "type": "SmallVariant", "id": "2027" }, { "type": "SmallVariant", "id": "2033" }, { "type": "SmallVariant", "id": "2634" }, { "type": "SmallVariant", "id": "3678" }, { "type": "SmallVariant", "id": "3683" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/WNT10A/relationships/variant_set?format=api", "related": "https://olida.ibsquare.be/api/genes/WNT10A/variants/?format=api" } }, "genecombination_set": { "meta": { "count": 9 }, "data": [ { "type": "GeneCombination", "id": "115" }, { "type": "GeneCombination", "id": "388" }, { "type": "GeneCombination", "id": "698" }, { "type": "GeneCombination", "id": "878" }, { "type": "GeneCombination", "id": "877" }, { "type": "GeneCombination", "id": "876" }, { "type": "GeneCombination", "id": "1244" }, { "type": "GeneCombination", "id": "1242" }, { "type": "GeneCombination", "id": "1241" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/WNT10A/relationships/genecombination_set?format=api", "related": "https://olida.ibsquare.be/api/genes/WNT10A/genecombinations/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genes/WNT10A/?format=api" } } ], "meta": { "database_name": "OLIgogenic diseases DAtabase (OLIDA)", "resource_url": "olida.ibsquare.be", "api_release_year": "2021", "api_developer": [ [ "Arnau Dillen", "arnau.dillen@ulb.ac.be" ], [ "Charlotte Nachtegael", "charlotte.nachtegael@ulb.be" ] ], "api_version": "0.3", "api_maintainers": [ [ "Charlotte Nachtegael", "charlotte.nachtegael@ulb.be" ] ], "api_documentation": [ "olida.ibsquare.be/api/swagger", "olida.ibsquare.be/api/redoc" ], "copyright": "Copyright (c) 2025 · OLIDA All Rights Reserved.", "license": "CC Attribution-NonCommercial 4.0 International License", "ontologies": { "ORDO": "http://bioportal.bioontology.org/ontologies/ORDO", "GENO": "http://purl.obolibrary.org/obo/geno.owl", "MI": "http://purl.obolibrary.org/obo/mi.owl", "NCIT": "http://purl.obolibrary.org/obo/ncit.owl", "OGI": "http://purl.obolibrary.org/obo/ogi.owl", "OGG": "http://purl.obolibrary.org/obo/ogg.owl" }, "relevant_publications_doi": [ "10.1093/nar/gkv1068", "10.1093/database/baac023" ], "size": 2 } }