Gene List
This API endpoint handles listing (/genes) and retrieval (/genes/<ID>/) of genes that are contained in the database due to their association to
genetic variants that are involved in at least one oligogenic combination in OLIDA.
GET /api/genecombinations/839/genes/?format=api
{ "data": [ { "type": "Gene", "id": "CACNA1A", "attributes": { "go_molecular_function": [ "['amyloid-beta binding', 'syntaxin binding', 'high voltage-gated calcium channel activity', 'protein binding', 'metal ion binding', 'voltage-gated calcium channel activity']" ], "pathway_id": [ "kegg_path:hsa04010", "kegg_path:hsa04020", "kegg_path:hsa04721", "kegg_path:hsa04723", "kegg_path:hsa04724", "kegg_path:hsa04725", "kegg_path:hsa04726", "kegg_path:hsa04727", "kegg_path:hsa04728", "kegg_path:hsa04730", "kegg_path:hsa04742", "kegg_path:hsa04930", "kegg_path:hsa05017", "kegg_path:hsa05032", "kegg_path:hsa05033", "R-HSA-112308", "R-HSA-112315", "R-HSA-112316", "R-HSA-1430728", "R-HSA-163685", "R-HSA-422356" ], "essential_gene": "Essential", "status": "CU", "uniprot_acc": "O00555", "ensembl_id": "None", "entrez_id": "ENSG00000141837", "chromosome_number": "19", "lastmodified": "2022-08-04T14:14:57.441767" }, "relationships": { "variant_set": { "meta": { "count": 2 }, "data": [ { "type": "SmallVariant", "id": "2481" }, { "type": "SmallVariant", "id": "3094" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/CACNA1A/relationships/variant_set?format=api", "related": "https://olida.ibsquare.be/api/genes/CACNA1A/variants/?format=api" } }, "genecombination_set": { "meta": { "count": 2 }, "data": [ { "type": "GeneCombination", "id": "839" }, { "type": "GeneCombination", "id": "1037" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/CACNA1A/relationships/genecombination_set?format=api", "related": "https://olida.ibsquare.be/api/genes/CACNA1A/genecombinations/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genes/CACNA1A/?format=api" } }, { "type": "Gene", "id": "SPG7", "attributes": { "go_molecular_function": [ "protein binding", "ATP-dependent peptidase activity", "peptidase activity", "ATP hydrolysis activity", "unfolded protein binding", "ATP binding", "zinc ion binding", "metalloendopeptidase activity" ], "pathway_id": [ "R-HSA-382551", "R-HSA-8949215", "R-HSA-8949664" ], "essential_gene": "Non-essential", "status": "CU", "uniprot_acc": "A0A2U3TZH1", "ensembl_id": "ENSG00000197912", "entrez_id": "6687", "chromosome_number": "16", "lastmodified": "2022-08-04T14:14:58.068653" }, "relationships": { "variant_set": { "meta": { "count": 5 }, "data": [ { "type": "SmallVariant", "id": "2471" }, { "type": "SmallVariant", "id": "2474" }, { "type": "SmallVariant", "id": "2476" }, { "type": "SmallVariant", "id": "2479" }, { "type": "SmallVariant", "id": "2482" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/SPG7/relationships/variant_set?format=api", "related": "https://olida.ibsquare.be/api/genes/SPG7/variants/?format=api" } }, "genecombination_set": { "meta": { "count": 6 }, "data": [ { "type": "GeneCombination", "id": "835" }, { "type": "GeneCombination", "id": "836" }, { "type": "GeneCombination", "id": "837" }, { "type": "GeneCombination", "id": "838" }, { "type": "GeneCombination", "id": "839" }, { "type": "GeneCombination", "id": "840" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/SPG7/relationships/genecombination_set?format=api", "related": "https://olida.ibsquare.be/api/genes/SPG7/genecombinations/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genes/SPG7/?format=api" } } ], "meta": { "database_name": "OLIgogenic diseases DAtabase (OLIDA)", "resource_url": "olida.ibsquare.be", "api_release_year": "2021", "api_developer": [ [ "Arnau Dillen", "arnau.dillen@ulb.ac.be" ], [ "Charlotte Nachtegael", "charlotte.nachtegael@ulb.be" ] ], "api_version": "0.3", "api_maintainers": [ [ "Charlotte Nachtegael", "charlotte.nachtegael@ulb.be" ] ], "api_documentation": [ "olida.ibsquare.be/api/swagger", "olida.ibsquare.be/api/redoc" ], "copyright": "Copyright (c) 2025 · OLIDA All Rights Reserved.", "license": "CC Attribution-NonCommercial 4.0 International License", "ontologies": { "ORDO": "http://bioportal.bioontology.org/ontologies/ORDO", "GENO": "http://purl.obolibrary.org/obo/geno.owl", "MI": "http://purl.obolibrary.org/obo/mi.owl", "NCIT": "http://purl.obolibrary.org/obo/ncit.owl", "OGI": "http://purl.obolibrary.org/obo/ogi.owl", "OGG": "http://purl.obolibrary.org/obo/ogg.owl" }, "relevant_publications_doi": [ "10.1093/nar/gkv1068", "10.1093/database/baac023" ], "size": 2 } }