Gene List
This API endpoint handles listing (/genes) and retrieval (/genes/<ID>/) of genes that are contained in the database due to their association to
genetic variants that are involved in at least one oligogenic combination in OLIDA.
GET /api/genecombinations/771/genes/?format=api
{ "data": [ { "type": "Gene", "id": "HK3", "attributes": { "go_molecular_function": [ "protein binding", "glucokinase activity", "mannokinase activity", "glucose binding", "fructokinase activity", "ATP binding", "hexokinase activity" ], "pathway_id": [ "kegg_path:hsa04910", "kegg_path:hsa05131", "kegg_path:hsa05230", "R-HSA-168256", "kegg_path:hsa00520", "kegg_path:hsa00052", "kegg_path:hsa01200", "kegg_path:hsa04973", "R-HSA-1430728", "R-HSA-70326", "kegg_path:hsa00051", "R-HSA-71387", "kegg_path:hsa04066", "kegg_path:hsa01100", "kegg_path:hsa00524", "kegg_path:hsa00010", "kegg_path:hsa00500", "kegg_path:hsa04930", "kegg_path:hsa04910", "kegg_path:hsa05230", "kegg_path:hsa05131", "kegg_path:hsa00520", "R-HSA-70171", "kegg_path:hsa01200", "kegg_path:hsa00052", "kegg_path:hsa00051", "kegg_path:hsa04973", "kegg_path:hsa01100", "R-HSA-6798695", "kegg_path:hsa04066", "kegg_path:hsa00500", "kegg_path:hsa04930", "R-HSA-168249", "kegg_path:hsa00010", "kegg_path:hsa00524" ], "essential_gene": null, "status": "CU", "uniprot_acc": "P52790", "ensembl_id": "ENSG00000160883", "entrez_id": "3101", "chromosome_number": "5", "lastmodified": "2022-08-04T14:14:59.725248" }, "relationships": { "variant_set": { "meta": { "count": 2 }, "data": [ { "type": "SmallVariant", "id": "2300" }, { "type": "SmallVariant", "id": "2335" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/HK3/relationships/variant_set?format=api", "related": "https://olida.ibsquare.be/api/genes/HK3/variants/?format=api" } }, "genecombination_set": { "meta": { "count": 2 }, "data": [ { "type": "GeneCombination", "id": "771" }, { "type": "GeneCombination", "id": "787" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/HK3/relationships/genecombination_set?format=api", "related": "https://olida.ibsquare.be/api/genes/HK3/genecombinations/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genes/HK3/?format=api" } }, { "type": "Gene", "id": "LGR4", "attributes": { "go_molecular_function": [ "G protein-coupled peptide receptor activity", "protein binding", "transmembrane signaling receptor activity", "protein-hormone receptor activity" ], "pathway_id": [ "R-HSA-4641263", "R-HSA-162582", "kegg_path:hsa04310", "R-HSA-195721", "R-HSA-201681" ], "essential_gene": "Essential", "status": "CU", "uniprot_acc": "Q9BXB1", "ensembl_id": "ENSG00000205213", "entrez_id": "55366", "chromosome_number": "11", "lastmodified": "2022-08-04T14:14:58.460900" }, "relationships": { "variant_set": { "meta": { "count": 1 }, "data": [ { "type": "SmallVariant", "id": "2299" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/LGR4/relationships/variant_set?format=api", "related": "https://olida.ibsquare.be/api/genes/LGR4/variants/?format=api" } }, "genecombination_set": { "meta": { "count": 1 }, "data": [ { "type": "GeneCombination", "id": "771" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/LGR4/relationships/genecombination_set?format=api", "related": "https://olida.ibsquare.be/api/genes/LGR4/genecombinations/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genes/LGR4/?format=api" } }, { "type": "Gene", "id": "VWF", "attributes": { "go_molecular_function": [ "protease binding", "protein binding", "identical protein binding", "protein N-terminus binding", "chaperone binding", "immunoglobulin binding", "integrin binding", "collagen binding", "extracellular matrix structural constituent" ], "pathway_id": [ "R-HSA-114608", "R-HSA-216083", "R-HSA-5674135", "kegg_path:hsa04611", "R-HSA-6802949", "kegg_path:hsa04510", "R-HSA-354192", "R-HSA-9671793", "kegg_path:hsa04151", "R-HSA-1643685", "R-HSA-9662001", "R-HSA-9672393", "R-HSA-5683057", "R-HSA-9656223", "kegg_path:hsa05165", "R-HSA-6802948", "R-HSA-76005", "kegg_path:hsa04512", "kegg_path:hsa04613", "R-HSA-162582", "R-HSA-372708", "kegg_path:hsa05171", "R-HSA-140877", "R-HSA-9649948", "R-HSA-9672391", "R-HSA-5684996", "R-HSA-6802952", "R-HSA-140837", "R-HSA-6802946", "R-HSA-5663202", "R-HSA-5673001", "R-HSA-6802955", "R-HSA-9651496", "R-HSA-1474244", "R-HSA-6802957", "R-HSA-109582", "R-HSA-430116", "R-HSA-75892", "R-HSA-76009", "R-HSA-76002", "kegg_path:hsa04610", "R-HSA-354194" ], "essential_gene": "Non-essential", "status": "CU", "uniprot_acc": "P04275", "ensembl_id": "ENSG00000110799", "entrez_id": "7450", "chromosome_number": "12", "lastmodified": "2022-08-04T14:14:58.928040" }, "relationships": { "variant_set": { "meta": { "count": 3 }, "data": [ { "type": "SmallVariant", "id": "2271" }, { "type": "SmallVariant", "id": "2272" }, { "type": "SmallVariant", "id": "2298" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/VWF/relationships/variant_set?format=api", "related": "https://olida.ibsquare.be/api/genes/VWF/variants/?format=api" } }, "genecombination_set": { "meta": { "count": 2 }, "data": [ { "type": "GeneCombination", "id": "764" }, { "type": "GeneCombination", "id": "771" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/VWF/relationships/genecombination_set?format=api", "related": "https://olida.ibsquare.be/api/genes/VWF/genecombinations/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genes/VWF/?format=api" } } ], "meta": { "database_name": "OLIgogenic diseases DAtabase (OLIDA)", "resource_url": "olida.ibsquare.be", "api_release_year": "2021", "api_developer": [ [ "Arnau Dillen", "arnau.dillen@ulb.ac.be" ], [ "Charlotte Nachtegael", "charlotte.nachtegael@ulb.be" ] ], "api_version": "0.3", "api_maintainers": [ [ "Charlotte Nachtegael", "charlotte.nachtegael@ulb.be" ] ], "api_documentation": [ "olida.ibsquare.be/api/swagger", "olida.ibsquare.be/api/redoc" ], "copyright": "Copyright (c) 2025 · OLIDA All Rights Reserved.", "license": "CC Attribution-NonCommercial 4.0 International License", "ontologies": { "ORDO": "http://bioportal.bioontology.org/ontologies/ORDO", "GENO": "http://purl.obolibrary.org/obo/geno.owl", "MI": "http://purl.obolibrary.org/obo/mi.owl", "NCIT": "http://purl.obolibrary.org/obo/ncit.owl", "OGI": "http://purl.obolibrary.org/obo/ogi.owl", "OGG": "http://purl.obolibrary.org/obo/ogg.owl" }, "relevant_publications_doi": [ "10.1093/nar/gkv1068", "10.1093/database/baac023" ], "size": 3 } }