Gene List
This API endpoint handles listing (/genes) and retrieval (/genes/<ID>/) of genes that are contained in the database due to their association to
genetic variants that are involved in at least one oligogenic combination in OLIDA.
GET /api/genecombinations/692/genes/?format=api
{ "data": [ { "type": "Gene", "id": "SCO2", "attributes": { "go_molecular_function": [ "copper ion binding", "protein-disulfide reductase activity", "protein binding", "copper chaperone activity" ], "pathway_id": [ "R-HSA-1428517", "R-HSA-212436", "R-HSA-3700989", "R-HSA-163200", "R-HSA-1430728", "R-HSA-73857", "R-HSA-611105", "kegg_path:hsa05230", "R-HSA-5628897", "R-HSA-74160" ], "essential_gene": "Essential", "status": "CU", "uniprot_acc": "O43819", "ensembl_id": "ENSG00000284194", "entrez_id": "9997", "chromosome_number": "22", "lastmodified": "2022-08-04T14:14:58.577720" }, "relationships": { "variant_set": { "meta": { "count": 1 }, "data": [ { "type": "SmallVariant", "id": "2008" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/SCO2/relationships/variant_set?format=api", "related": "https://olida.ibsquare.be/api/genes/SCO2/variants/?format=api" } }, "genecombination_set": { "meta": { "count": 1 }, "data": [ { "type": "GeneCombination", "id": "692" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/SCO2/relationships/genecombination_set?format=api", "related": "https://olida.ibsquare.be/api/genes/SCO2/genecombinations/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genes/SCO2/?format=api" } }, { "type": "Gene", "id": "SMO", "attributes": { "go_molecular_function": [ "protein binding", "patched binding", "G protein-coupled receptor activity" ], "pathway_id": [ "R-HSA-373080", "R-HSA-5358351", "R-HSA-500792", "kegg_path:hsa04360", "R-HSA-5617833", "kegg_path:hsa05200", "R-HSA-5632684", "kegg_path:hsa05217", "R-HSA-1852241", "kegg_path:hsa04340", "R-HSA-5620920", "kegg_path:hsa05205", "R-HSA-5635838", "R-HSA-162582", "R-HSA-372790", "R-HSA-5610787", "R-HSA-5620922" ], "essential_gene": "Essential", "status": "CU", "uniprot_acc": "Q99835", "ensembl_id": "ENSG00000128602", "entrez_id": "6608", "chromosome_number": "7", "lastmodified": "2021-10-18T11:00:44.736502" }, "relationships": { "variant_set": { "meta": { "count": 2 }, "data": [ { "type": "SmallVariant", "id": "919" }, { "type": "SmallVariant", "id": "2009" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/SMO/relationships/variant_set?format=api", "related": "https://olida.ibsquare.be/api/genes/SMO/variants/?format=api" } }, "genecombination_set": { "meta": { "count": 2 }, "data": [ { "type": "GeneCombination", "id": "288" }, { "type": "GeneCombination", "id": "692" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/SMO/relationships/genecombination_set?format=api", "related": "https://olida.ibsquare.be/api/genes/SMO/genecombinations/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genes/SMO/?format=api" } } ], "meta": { "database_name": "OLIgogenic diseases DAtabase (OLIDA)", "resource_url": "olida.ibsquare.be", "api_release_year": "2021", "api_developer": [ [ "Arnau Dillen", "arnau.dillen@ulb.ac.be" ], [ "Charlotte Nachtegael", "charlotte.nachtegael@ulb.be" ] ], "api_version": "0.3", "api_maintainers": [ [ "Charlotte Nachtegael", "charlotte.nachtegael@ulb.be" ] ], "api_documentation": [ "olida.ibsquare.be/api/swagger", "olida.ibsquare.be/api/redoc" ], "copyright": "Copyright (c) 2025 · OLIDA All Rights Reserved.", "license": "CC Attribution-NonCommercial 4.0 International License", "ontologies": { "ORDO": "http://bioportal.bioontology.org/ontologies/ORDO", "GENO": "http://purl.obolibrary.org/obo/geno.owl", "MI": "http://purl.obolibrary.org/obo/mi.owl", "NCIT": "http://purl.obolibrary.org/obo/ncit.owl", "OGI": "http://purl.obolibrary.org/obo/ogi.owl", "OGG": "http://purl.obolibrary.org/obo/ogg.owl" }, "relevant_publications_doi": [ "10.1093/nar/gkv1068", "10.1093/database/baac023" ], "size": 2 } }