Gene List
This API endpoint handles listing (/genes) and retrieval (/genes/<ID>/) of genes that are contained in the database due to their association to
genetic variants that are involved in at least one oligogenic combination in OLIDA.
GET /api/genecombinations/69/genes/?format=api
{ "data": [ { "type": "Gene", "id": "FIGLA", "attributes": { "go_molecular_function": [ "protein binding", "DNA-binding transcription factor activity, RNA polymerase II-specific", "E-box binding", "DNA-binding transcription activator activity, RNA polymerase II-specific", "sequence-specific double-stranded DNA binding", "RNA polymerase II transcription regulatory region sequence-specific DNA binding", "bHLH transcription factor binding", "protein dimerization activity" ], "pathway_id": [ "None", "None" ], "essential_gene": "Non-essential", "status": "CU", "uniprot_acc": "Q6QHK4", "ensembl_id": "ENSG00000183733", "entrez_id": "344018", "chromosome_number": "2", "lastmodified": "2021-10-18T11:00:44.513830" }, "relationships": { "variant_set": { "meta": { "count": 2 }, "data": [ { "type": "SmallVariant", "id": "194" }, { "type": "SmallVariant", "id": "2267" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/FIGLA/relationships/variant_set?format=api", "related": "https://olida.ibsquare.be/api/genes/FIGLA/variants/?format=api" } }, "genecombination_set": { "meta": { "count": 2 }, "data": [ { "type": "GeneCombination", "id": "69" }, { "type": "GeneCombination", "id": "763" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/FIGLA/relationships/genecombination_set?format=api", "related": "https://olida.ibsquare.be/api/genes/FIGLA/genecombinations/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genes/FIGLA/?format=api" } }, { "type": "Gene", "id": "GDF9", "attributes": { "go_molecular_function": [ "['type I activin receptor binding', 'cytokine activity', 'growth factor activity']" ], "pathway_id": [ "kegg_path:hsa04060" ], "essential_gene": "Non-essential", "status": "CU", "uniprot_acc": "O60383", "ensembl_id": "None", "entrez_id": "ENSG00000164404", "chromosome_number": "5", "lastmodified": "2021-10-18T11:00:44.757951" }, "relationships": { "variant_set": { "meta": { "count": 5 }, "data": [ { "type": "SmallVariant", "id": "186" }, { "type": "SmallVariant", "id": "195" }, { "type": "SmallVariant", "id": "2321" }, { "type": "SmallVariant", "id": "2322" }, { "type": "SmallVariant", "id": "3663" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/GDF9/relationships/variant_set?format=api", "related": "https://olida.ibsquare.be/api/genes/GDF9/variants/?format=api" } }, "genecombination_set": { "meta": { "count": 4 }, "data": [ { "type": "GeneCombination", "id": "65" }, { "type": "GeneCombination", "id": "69" }, { "type": "GeneCombination", "id": "780" }, { "type": "GeneCombination", "id": "1232" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/GDF9/relationships/genecombination_set?format=api", "related": "https://olida.ibsquare.be/api/genes/GDF9/genecombinations/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genes/GDF9/?format=api" } } ], "meta": { "database_name": "OLIgogenic diseases DAtabase (OLIDA)", "resource_url": "olida.ibsquare.be", "api_release_year": "2021", "api_developer": [ [ "Arnau Dillen", "arnau.dillen@ulb.ac.be" ], [ "Charlotte Nachtegael", "charlotte.nachtegael@ulb.be" ] ], "api_version": "0.3", "api_maintainers": [ [ "Charlotte Nachtegael", "charlotte.nachtegael@ulb.be" ] ], "api_documentation": [ "olida.ibsquare.be/api/swagger", "olida.ibsquare.be/api/redoc" ], "copyright": "Copyright (c) 2025 · OLIDA All Rights Reserved.", "license": "CC Attribution-NonCommercial 4.0 International License", "ontologies": { "ORDO": "http://bioportal.bioontology.org/ontologies/ORDO", "GENO": "http://purl.obolibrary.org/obo/geno.owl", "MI": "http://purl.obolibrary.org/obo/mi.owl", "NCIT": "http://purl.obolibrary.org/obo/ncit.owl", "OGI": "http://purl.obolibrary.org/obo/ogi.owl", "OGG": "http://purl.obolibrary.org/obo/ogg.owl" }, "relevant_publications_doi": [ "10.1093/nar/gkv1068", "10.1093/database/baac023" ], "size": 2 } }