Gene List
This API endpoint handles listing (/genes) and retrieval (/genes/<ID>/) of genes that are contained in the database due to their association to
genetic variants that are involved in at least one oligogenic combination in OLIDA.
GET /api/genecombinations/416/genes/?format=api
{ "data": [ { "type": "Gene", "id": "DNAH5", "attributes": { "go_molecular_function": [], "pathway_id": [ "kegg_path:hsa05014", "kegg_path:hsa05016", "kegg_path:hsa05022" ], "essential_gene": "Essential", "status": "CU", "uniprot_acc": "Q8TE73", "ensembl_id": "ENSG00000039139", "entrez_id": "1767", "chromosome_number": "5", "lastmodified": "2021-10-18T11:00:44.925980" }, "relationships": { "variant_set": { "meta": { "count": 3 }, "data": [ { "type": "SmallVariant", "id": "1337" }, { "type": "SmallVariant", "id": "1339" }, { "type": "SmallVariant", "id": "1342" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/DNAH5/relationships/variant_set?format=api", "related": "https://olida.ibsquare.be/api/genes/DNAH5/variants/?format=api" } }, "genecombination_set": { "meta": { "count": 2 }, "data": [ { "type": "GeneCombination", "id": "416" }, { "type": "GeneCombination", "id": "417" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/DNAH5/relationships/genecombination_set?format=api", "related": "https://olida.ibsquare.be/api/genes/DNAH5/genecombinations/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genes/DNAH5/?format=api" } }, { "type": "Gene", "id": "DNAH6", "attributes": { "go_molecular_function": [ "dynein intermediate chain binding", "ATP hydrolysis activity", "ATP binding", "microtubule motor activity", "nucleotide binding", "dynein light intermediate chain binding", "minus-end-directed microtubule motor activity" ], "pathway_id": [ "kegg_path:hsa05022", "kegg_path:hsa05014", "kegg_path:hsa05016" ], "essential_gene": null, "status": "CU", "uniprot_acc": "Q9C0G6", "ensembl_id": "ENSG00000115423", "entrez_id": "1768", "chromosome_number": "2", "lastmodified": "2021-10-18T11:00:44.855198" }, "relationships": { "variant_set": { "meta": { "count": 6 }, "data": [ { "type": "SmallVariant", "id": "1335" }, { "type": "SmallVariant", "id": "1336" }, { "type": "SmallVariant", "id": "1338" }, { "type": "SmallVariant", "id": "1340" }, { "type": "SmallVariant", "id": "1341" }, { "type": "SmallVariant", "id": "1344" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/DNAH6/relationships/variant_set?format=api", "related": "https://olida.ibsquare.be/api/genes/DNAH6/variants/?format=api" } }, "genecombination_set": { "meta": { "count": 4 }, "data": [ { "type": "GeneCombination", "id": "415" }, { "type": "GeneCombination", "id": "416" }, { "type": "GeneCombination", "id": "417" }, { "type": "GeneCombination", "id": "418" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/DNAH6/relationships/genecombination_set?format=api", "related": "https://olida.ibsquare.be/api/genes/DNAH6/genecombinations/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genes/DNAH6/?format=api" } } ], "meta": { "database_name": "OLIgogenic diseases DAtabase (OLIDA)", "resource_url": "olida.ibsquare.be", "api_release_year": "2021", "api_developer": [ [ "Arnau Dillen", "arnau.dillen@ulb.ac.be" ], [ "Charlotte Nachtegael", "charlotte.nachtegael@ulb.be" ] ], "api_version": "0.3", "api_maintainers": [ [ "Charlotte Nachtegael", "charlotte.nachtegael@ulb.be" ] ], "api_documentation": [ "olida.ibsquare.be/api/swagger", "olida.ibsquare.be/api/redoc" ], "copyright": "Copyright (c) 2025 · OLIDA All Rights Reserved.", "license": "CC Attribution-NonCommercial 4.0 International License", "ontologies": { "ORDO": "http://bioportal.bioontology.org/ontologies/ORDO", "GENO": "http://purl.obolibrary.org/obo/geno.owl", "MI": "http://purl.obolibrary.org/obo/mi.owl", "NCIT": "http://purl.obolibrary.org/obo/ncit.owl", "OGI": "http://purl.obolibrary.org/obo/ogi.owl", "OGG": "http://purl.obolibrary.org/obo/ogg.owl" }, "relevant_publications_doi": [ "10.1093/nar/gkv1068", "10.1093/database/baac023" ], "size": 2 } }