Gene List
This API endpoint handles listing (/genes) and retrieval (/genes/<ID>/) of genes that are contained in the database due to their association to
genetic variants that are involved in at least one oligogenic combination in OLIDA.
GET /api/genecombinations/365/genes/?format=api
{ "data": [ { "type": "Gene", "id": "DSP", "attributes": { "go_molecular_function": [ "structural constituent of cytoskeleton", "protein binding", "cell adhesion molecule binding", "structural molecule activity" ], "pathway_id": [ "R-HSA-168249", "R-HSA-111465", "R-HSA-351906", "R-HSA-168256", "R-HSA-109581", "R-HSA-5357801", "kegg_path:hsa05412", "R-HSA-6809371", "R-HSA-1266738", "R-HSA-6805567", "R-HSA-75153", "R-HSA-6798695" ], "essential_gene": "Essential", "status": "CU", "uniprot_acc": "P15924", "ensembl_id": "ENSG00000096696", "entrez_id": "1832", "chromosome_number": "6", "lastmodified": "2021-10-18T11:00:44.470956" }, "relationships": { "variant_set": { "meta": { "count": 4 }, "data": [ { "type": "SmallVariant", "id": "454" }, { "type": "SmallVariant", "id": "460" }, { "type": "SmallVariant", "id": "1140" }, { "type": "SmallVariant", "id": "1142" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/DSP/relationships/variant_set?format=api", "related": "https://olida.ibsquare.be/api/genes/DSP/variants/?format=api" } }, "genecombination_set": { "meta": { "count": 2 }, "data": [ { "type": "GeneCombination", "id": "150" }, { "type": "GeneCombination", "id": "365" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/DSP/relationships/genecombination_set?format=api", "related": "https://olida.ibsquare.be/api/genes/DSP/genecombinations/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genes/DSP/?format=api" } }, { "type": "Gene", "id": "JUP", "attributes": { "go_molecular_function": [ "protein binding" ], "pathway_id": [ "R-HSA-162582", "R-HSA-4420097", "R-HSA-421270", "kegg_path:hsa05200", "R-HSA-5218920", "R-HSA-168249", "R-HSA-446728", "R-HSA-1266738", "R-HSA-9006934", "kegg_path:hsa05200", "R-HSA-6809371", "R-HSA-162582", "R-HSA-168256", "R-HSA-421270", "R-HSA-4420097", "kegg_path:hsa05221", "kegg_path:hsa05412", "kegg_path:hsa05200", "R-HSA-5218920", "kegg_path:hsa05202", "R-HSA-168249", "R-HSA-1500931", "R-HSA-194138", "R-HSA-6798695", "kegg_path:hsa05221", "R-HSA-446728", "R-HSA-6805567", "kegg_path:hsa05226", "kegg_path:hsa05202", "R-HSA-9006934", "R-HSA-1266738", "kegg_path:hsa05412", "kegg_path:hsa05200", "R-HSA-6809371", "R-HSA-418990", "kegg_path:hsa05226", "R-HSA-168256", "kegg_path:hsa05221", "kegg_path:hsa05412", "kegg_path:hsa05202", "R-HSA-1500931", "R-HSA-194138", "R-HSA-6798695", "kegg_path:hsa05221", "R-HSA-6805567", "kegg_path:hsa05226", "kegg_path:hsa05202", "kegg_path:hsa05412", "R-HSA-418990", "kegg_path:hsa05226" ], "essential_gene": "Essential", "status": "CU", "uniprot_acc": "P14923", "ensembl_id": "ENSG00000173801", "entrez_id": "3728", "chromosome_number": "17", "lastmodified": "2021-10-18T11:00:44.974895" }, "relationships": { "variant_set": { "meta": { "count": 2 }, "data": [ { "type": "SmallVariant", "id": "1141" }, { "type": "SmallVariant", "id": "1143" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/JUP/relationships/variant_set?format=api", "related": "https://olida.ibsquare.be/api/genes/JUP/variants/?format=api" } }, "genecombination_set": { "meta": { "count": 1 }, "data": [ { "type": "GeneCombination", "id": "365" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/JUP/relationships/genecombination_set?format=api", "related": "https://olida.ibsquare.be/api/genes/JUP/genecombinations/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genes/JUP/?format=api" } } ], "meta": { "database_name": "OLIgogenic diseases DAtabase (OLIDA)", "resource_url": "olida.ibsquare.be", "api_release_year": "2021", "api_developer": [ [ "Arnau Dillen", "arnau.dillen@ulb.ac.be" ], [ "Charlotte Nachtegael", "charlotte.nachtegael@ulb.be" ] ], "api_version": "0.3", "api_maintainers": [ [ "Charlotte Nachtegael", "charlotte.nachtegael@ulb.be" ] ], "api_documentation": [ "olida.ibsquare.be/api/swagger", "olida.ibsquare.be/api/redoc" ], "copyright": "Copyright (c) 2025 · OLIDA All Rights Reserved.", "license": "CC Attribution-NonCommercial 4.0 International License", "ontologies": { "ORDO": "http://bioportal.bioontology.org/ontologies/ORDO", "GENO": "http://purl.obolibrary.org/obo/geno.owl", "MI": "http://purl.obolibrary.org/obo/mi.owl", "NCIT": "http://purl.obolibrary.org/obo/ncit.owl", "OGI": "http://purl.obolibrary.org/obo/ogi.owl", "OGG": "http://purl.obolibrary.org/obo/ogg.owl" }, "relevant_publications_doi": [ "10.1093/nar/gkv1068", "10.1093/database/baac023" ], "size": 2 } }