Gene List
This API endpoint handles listing (/genes) and retrieval (/genes/<ID>/) of genes that are contained in the database due to their association to
genetic variants that are involved in at least one oligogenic combination in OLIDA.
GET /api/genecombinations/276/genes/?format=api
{ "data": [ { "type": "Gene", "id": "CAPN3", "attributes": { "go_molecular_function": [ "protein binding", "hydrolase activity", "peptidase activity", "calcium ion binding", "cysteine-type peptidase activity", "calcium-dependent cysteine-type endopeptidase activity", "metal ion binding" ], "pathway_id": [ "R-HSA-1474244", "R-HSA-1474228" ], "essential_gene": "Non-essential", "status": "CU", "uniprot_acc": "P20807", "ensembl_id": "ENSG00000092529", "entrez_id": "825", "chromosome_number": "15", "lastmodified": "2021-10-18T11:00:44.495422" }, "relationships": { "variant_set": { "meta": { "count": 3 }, "data": [ { "type": "SmallVariant", "id": "890" }, { "type": "SmallVariant", "id": "1188" }, { "type": "SmallVariant", "id": "1189" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/CAPN3/relationships/variant_set?format=api", "related": "https://olida.ibsquare.be/api/genes/CAPN3/variants/?format=api" } }, "genecombination_set": { "meta": { "count": 2 }, "data": [ { "type": "GeneCombination", "id": "276" }, { "type": "GeneCombination", "id": "381" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/CAPN3/relationships/genecombination_set?format=api", "related": "https://olida.ibsquare.be/api/genes/CAPN3/genecombinations/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genes/CAPN3/?format=api" } }, { "type": "Gene", "id": "DES", "attributes": { "go_molecular_function": [ "structural constituent of cytoskeleton", "protein binding", "identical protein binding" ], "pathway_id": [ "R-HSA-390522", "kegg_path:hsa05414", "kegg_path:hsa05412", "kegg_path:hsa05410", "R-HSA-397014" ], "essential_gene": "Non-essential", "status": "CU", "uniprot_acc": "P17661", "ensembl_id": "ENSG00000175084", "entrez_id": "1674", "chromosome_number": "2", "lastmodified": "2021-10-18T11:00:44.574288" }, "relationships": { "variant_set": { "meta": { "count": 3 }, "data": [ { "type": "SmallVariant", "id": "370" }, { "type": "SmallVariant", "id": "891" }, { "type": "SmallVariant", "id": "1060" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/DES/relationships/variant_set?format=api", "related": "https://olida.ibsquare.be/api/genes/DES/variants/?format=api" } }, "genecombination_set": { "meta": { "count": 3 }, "data": [ { "type": "GeneCombination", "id": "128" }, { "type": "GeneCombination", "id": "276" }, { "type": "GeneCombination", "id": "346" } ], "links": { "self": "https://olida.ibsquare.be/api/genes/DES/relationships/genecombination_set?format=api", "related": "https://olida.ibsquare.be/api/genes/DES/genecombinations/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genes/DES/?format=api" } } ], "meta": { "database_name": "OLIgogenic diseases DAtabase (OLIDA)", "resource_url": "olida.ibsquare.be", "api_release_year": "2021", "api_developer": [ [ "Arnau Dillen", "arnau.dillen@ulb.ac.be" ], [ "Charlotte Nachtegael", "charlotte.nachtegael@ulb.be" ] ], "api_version": "0.3", "api_maintainers": [ [ "Charlotte Nachtegael", "charlotte.nachtegael@ulb.be" ] ], "api_documentation": [ "olida.ibsquare.be/api/swagger", "olida.ibsquare.be/api/redoc" ], "copyright": "Copyright (c) 2025 · OLIDA All Rights Reserved.", "license": "CC Attribution-NonCommercial 4.0 International License", "ontologies": { "ORDO": "http://bioportal.bioontology.org/ontologies/ORDO", "GENO": "http://purl.obolibrary.org/obo/geno.owl", "MI": "http://purl.obolibrary.org/obo/mi.owl", "NCIT": "http://purl.obolibrary.org/obo/ncit.owl", "OGI": "http://purl.obolibrary.org/obo/ogi.owl", "OGG": "http://purl.obolibrary.org/obo/ogg.owl" }, "relevant_publications_doi": [ "10.1093/nar/gkv1068", "10.1093/database/baac023" ], "size": 2 } }