Gene Combination List
This API endpoint handles listing (/references) and retrieval (/references/<ID>/) of References from the database
that support the inclusion of at least one oligogenic combination in OLIDA.
GET /api/genes/BBS5/genecombinations/?format=api
{ "data": [ { "type": "GeneCombination", "id": "60", "attributes": { "gene_relationship": [ "Involved in the same disease", "Affecting the same tissue", "Same pathway", "Relevant pathways for phenotype" ], "protein_interactions": [], "common_pathways": [ "Cilium Assembly", "BBSome-mediated cargo-targeting to cilium" ], "genecomb_metascore": 3, "lastmodified": "2021-10-18T11:00:47.928224" }, "relationships": { "combination_set": { "meta": { "count": 3 }, "data": [ { "type": "Combination", "id": "OLI083" }, { "type": "Combination", "id": "OLI621" }, { "type": "Combination", "id": "OLI1125" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/60/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/60/combinations/?format=api" } }, "genes": { "meta": { "count": 2 }, "data": [ { "type": "Gene", "id": "BBS10" }, { "type": "Gene", "id": "BBS5" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/60/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/60/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/60/?format=api" } }, { "type": "GeneCombination", "id": "423", "attributes": { "gene_relationship": [ "Involved in the same disease", "Same pathway", "Relevant pathways for phenotype" ], "protein_interactions": [ "(BBS1, BBS4)", "(BBS1, BBS5)", "(BBS1, BBS7)", "(BBS4, BBS5)", "(BBS4, BBS7)", "(BBS5, BBS7)" ], "common_pathways": [ "Cilium Assembly", "Organelle biogenesis and maintenance", "Cargo trafficking to the periciliary membrane", "BBSome-mediated cargo-targeting to cilium", "Cargo trafficking to the periciliary membrane" ], "genecomb_metascore": 2, "lastmodified": "2021-10-18T11:01:08.160738" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI617" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/423/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/423/combinations/?format=api" } }, "genes": { "meta": { "count": 5 }, "data": [ { "type": "Gene", "id": "BBS1" }, { "type": "Gene", "id": "BBS4" }, { "type": "Gene", "id": "BBS5" }, { "type": "Gene", "id": "BBS7" }, { "type": "Gene", "id": "NPHP1" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/423/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/423/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/423/?format=api" } }, { "type": "GeneCombination", "id": "424", "attributes": { "gene_relationship": [ "Colocalization", "Same pathway", "Involved in the same disease" ], "protein_interactions": [ "(BBS1, BBS5)" ], "common_pathways": [ "BBSome-mediated cargo-targeting to cilium", "Cilium Assembly", "Organelle biogenesis and maintenance", "Cargo trafficking to the periciliary membrane" ], "genecomb_metascore": 3, "lastmodified": "2024-03-01T14:32:00.405923" }, "relationships": { "combination_set": { "meta": { "count": 2 }, "data": [ { "type": "Combination", "id": "OLI618" }, { "type": "Combination", "id": "OLI1438" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/424/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/424/combinations/?format=api" } }, "genes": { "meta": { "count": 2 }, "data": [ { "type": "Gene", "id": "BBS1" }, { "type": "Gene", "id": "BBS5" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/424/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/424/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/424/?format=api" } }, { "type": "GeneCombination", "id": "822", "attributes": { "gene_relationship": [ "Affecting the same tissue", "Involved in the same disease", "Same protein complex" ], "protein_interactions": [], "common_pathways": [], "genecomb_metascore": 2, "lastmodified": "2024-03-01T14:52:17.418172" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI1134" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/822/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/822/combinations/?format=api" } }, "genes": { "meta": { "count": 2 }, "data": [ { "type": "Gene", "id": "BBS5" }, { "type": "Gene", "id": "TRIM32" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/822/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/822/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/822/?format=api" } }, { "type": "GeneCombination", "id": "1017", "attributes": { "gene_relationship": [ "Colocalization", "Same pathway", "Involved in the same disease" ], "protein_interactions": [], "common_pathways": [ "BBSome-mediated cargo-targeting to cilium", "Cilium Assembly", "Organelle biogenesis and maintenance", "Cargo trafficking to the periciliary membrane" ], "genecomb_metascore": 2, "lastmodified": "2024-03-01T14:21:20.327935" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI1448" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/1017/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/1017/combinations/?format=api" } }, "genes": { "meta": { "count": 2 }, "data": [ { "type": "Gene", "id": "BBS5" }, { "type": "Gene", "id": "MKKS" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/1017/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/1017/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/1017/?format=api" } }, { "type": "GeneCombination", "id": "1177", "attributes": { "gene_relationship": [], "protein_interactions": [], "common_pathways": [ "Organelle biogenesis and maintenance", "Cilium Assembly" ], "genecomb_metascore": 2, "lastmodified": "2024-02-29T15:02:21.842670" }, "relationships": { "combination_set": { "meta": { "count": 1 }, "data": [ { "type": "Combination", "id": "OLI1664" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/1177/relationships/combination_set?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/1177/combinations/?format=api" } }, "genes": { "meta": { "count": 2 }, "data": [ { "type": "Gene", "id": "BBS5" }, { "type": "Gene", "id": "NPHP4" } ], "links": { "self": "https://olida.ibsquare.be/api/genecombinations/1177/relationships/genes?format=api", "related": "https://olida.ibsquare.be/api/genecombinations/1177/genes/?format=api" } } }, "links": { "self": "https://olida.ibsquare.be/api/genecombinations/1177/?format=api" } } ] }