Combination List
This API endpoint handles listing (/combinations) and retrieval (/combinations/{combination_pk}/) of oligogenic combinations from the database
GET /api/references/862/combinations/?format=api&ordering=-oligogenic_effect
{ "data": [ { "type": "Combination", "id": "OLI637", "attributes": { "scores": { "familial_evidence": 0, "statistical_evidence_manual": 0, "statistical_evidence_knowledge": 0, "statistical_evidence_metascore": 0, "functional_gene_evidence_manual": 0, "functional_gene_evidence_manual_harmonized": 0, "functional_gene_evidence_knowledge": 0, "functional_gene_evidence_metascore": 0, "functional_variant_evidence_manual": 0, "functional_variant_evidence_knowledge": 0, "functional_variant_evidence_metascore": 0, "functional_final_manual": 0, "functional_final_metascore": 0, "final_manual": 0, "final_metascore": 0 }, "omim_id": [ "OMIM613954", "OMIM615515", "OMIM611895", "OMIM616208", "OMIM205250", "OMIM614696", "OMIM617839", "OMIM608031", "OMIM105400", "OMIM606070", "OMIM614808", "OMIM608030", "OMIM612577", "OMIM613435", "OMIM615426", "OMIM616437", "OMIM608627", "OMIM606640", "OMIM617892", "OMIM300857", "OMIM612069" ], "oligogenic_effect": "Unknown", "status": "CU", "effect_predicted": false, "ethnicity": "Australian", "lastmodified": "2021-11-16T17:59:49.372841" }, "relationships": { "diseases": { "meta": { "count": 1 }, "data": [ { "type": "Disease", "id": "803" } ], "links": { "self": "https://olida.ibsquare.be/api/combinations/OLI637/relationships/diseases?format=api", "related": "https://olida.ibsquare.be/api/combinations/OLI637/diseases/?format=api" } }, "variant_set": { "meta": { "count": 2 }, "data": [ { "type": "SmallVariant", "id": "532" }, { "type": "CopyNumberVariant", "id": "530" } ], "links": { "self": "https://olida.ibsquare.be/api/combinations/OLI637/relationships/variant_set?format=api", "related": "https://olida.ibsquare.be/api/combinations/OLI637/variants/?format=api" } }, "reference_set": { "meta": { "count": 1 }, "data": [ { "type": "Reference", "id": "862" } ], "links": { "self": "https://olida.ibsquare.be/api/combinations/OLI637/relationships/reference_set?format=api", "related": "https://olida.ibsquare.be/api/combinations/OLI637/references/?format=api" } }, "gene_combination": { "links": { "self": "https://olida.ibsquare.be/api/combinations/OLI637/relationships/gene_combination?format=api", "related": "https://olida.ibsquare.be/api/combinations/OLI637/genecombinations/?format=api" }, "data": { "type": "GeneCombination", "id": "435" } } }, "links": { "self": "https://olida.ibsquare.be/api/combinations/OLI637/?format=api" } }, { "type": "Combination", "id": "OLI638", "attributes": { "scores": { "familial_evidence": 0, "statistical_evidence_manual": 0, "statistical_evidence_knowledge": 0, "statistical_evidence_metascore": 0, "functional_gene_evidence_manual": 0, "functional_gene_evidence_manual_harmonized": 0, "functional_gene_evidence_knowledge": 0, "functional_gene_evidence_metascore": 0, "functional_variant_evidence_manual": 0, "functional_variant_evidence_knowledge": 0, "functional_variant_evidence_metascore": 0, "functional_final_manual": 0, "functional_final_metascore": 0, "final_manual": 0, "final_metascore": 0 }, "omim_id": [ "OMIM613954", "OMIM615515", "OMIM611895", "OMIM616208", "OMIM205250", "OMIM614696", "OMIM617839", "OMIM608031", "OMIM105400", "OMIM606070", "OMIM614808", "OMIM608030", "OMIM612577", "OMIM613435", "OMIM615426", "OMIM616437", "OMIM608627", "OMIM606640", "OMIM617892", "OMIM300857", "OMIM612069" ], "oligogenic_effect": "Unknown", "status": "CU", "effect_predicted": false, "ethnicity": "Australian", "lastmodified": "2021-11-16T17:59:49.386782" }, "relationships": { "diseases": { "meta": { "count": 1 }, "data": [ { "type": "Disease", "id": "803" } ], "links": { "self": "https://olida.ibsquare.be/api/combinations/OLI638/relationships/diseases?format=api", "related": "https://olida.ibsquare.be/api/combinations/OLI638/diseases/?format=api" } }, "variant_set": { "meta": { "count": 2 }, "data": [ { "type": "SmallVariant", "id": "1382" }, { "type": "CopyNumberVariant", "id": "530" } ], "links": { "self": "https://olida.ibsquare.be/api/combinations/OLI638/relationships/variant_set?format=api", "related": "https://olida.ibsquare.be/api/combinations/OLI638/variants/?format=api" } }, "reference_set": { "meta": { "count": 1 }, "data": [ { "type": "Reference", "id": "862" } ], "links": { "self": "https://olida.ibsquare.be/api/combinations/OLI638/relationships/reference_set?format=api", "related": "https://olida.ibsquare.be/api/combinations/OLI638/references/?format=api" } }, "gene_combination": { "links": { "self": "https://olida.ibsquare.be/api/combinations/OLI638/relationships/gene_combination?format=api", "related": "https://olida.ibsquare.be/api/combinations/OLI638/genecombinations/?format=api" }, "data": { "type": "GeneCombination", "id": "435" } } }, "links": { "self": "https://olida.ibsquare.be/api/combinations/OLI638/?format=api" } } ], "meta": { "database_name": "OLIgogenic diseases DAtabase (OLIDA)", "resource_url": "olida.ibsquare.be", "api_release_year": "2021", "api_developer": [ [ "Arnau Dillen", "arnau.dillen@ulb.ac.be" ], [ "Charlotte Nachtegael", "charlotte.nachtegael@ulb.be" ] ], "api_version": "0.3", "api_maintainers": [ [ "Charlotte Nachtegael", "charlotte.nachtegael@ulb.be" ] ], "api_documentation": [ "olida.ibsquare.be/api/swagger", "olida.ibsquare.be/api/redoc" ], "copyright": "Copyright (c) 2024 · OLIDA All Rights Reserved.", "license": "CC Attribution-NonCommercial 4.0 International License", "ontologies": { "ORDO": "http://bioportal.bioontology.org/ontologies/ORDO", "GENO": "http://purl.obolibrary.org/obo/geno.owl", "MI": "http://purl.obolibrary.org/obo/mi.owl", "NCIT": "http://purl.obolibrary.org/obo/ncit.owl", "OGI": "http://purl.obolibrary.org/obo/ogi.owl", "OGG": "http://purl.obolibrary.org/obo/ogg.owl" }, "relevant_publications_doi": [ "10.1093/nar/gkv1068", "10.1093/database/baac023" ], "size": 2 } }